Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 AC004980.1-204ENST00000429707 299 ntBASIC21.48■■□□□ 1.03
SCLT1Q96NL6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 NAPSB-206ENST00000562112 1266 ntBASIC21.48■■□□□ 1.03
SCLT1Q96NL6 HLA-A-209ENST00000638375 975 ntBASIC21.48■■□□□ 1.03
SCLT1Q96NL6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.48■■□□□ 1.03
SCLT1Q96NL6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.47■■□□□ 1.03
SCLT1Q96NL6 AC097493.4-201ENST00000641197 219 ntBASIC21.47■■□□□ 1.03
SCLT1Q96NL6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SCLT1Q96NL6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 B3GAT3P1-201ENST00000471720 806 ntBASIC21.46■■□□□ 1.03
SCLT1Q96NL6 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.46■■□□□ 1.03
SCLT1Q96NL6 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SCLT1Q96NL6 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SCLT1Q96NL6 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 FITM1-202ENST00000559294 800 ntBASIC21.45■■□□□ 1.02
SCLT1Q96NL6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 AL162377.1-201ENST00000618844 1793 ntBASIC21.45■■□□□ 1.02
SCLT1Q96NL6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.45■■□□□ 1.02
SCLT1Q96NL6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms