Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 AL353801.3-201ENST00000609898 542 ntBASIC18.97■□□□□ 0.63
CFAP54Q96N23 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 REXO1L6P-202ENST00000619970 1078 ntBASIC18.97■□□□□ 0.63
CFAP54Q96N23 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.97■□□□□ 0.63
CFAP54Q96N23 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.97■□□□□ 0.63
CFAP54Q96N23 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CFAP54Q96N23 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP54Q96N23 AC005229.4-201ENST00000610085 2198 ntBASIC18.96■□□□□ 0.63
CFAP54Q96N23 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP54Q96N23 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP54Q96N23 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP54Q96N23 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 AL121772.3-201ENST00000610840 674 ntBASIC18.96■□□□□ 0.63
CFAP54Q96N23 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP54Q96N23 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 CHCHD2P8-201ENST00000429873 447 ntBASIC18.96■□□□□ 0.63
CFAP54Q96N23 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 RASA4DP-201ENST00000460726 1199 ntBASIC18.96■□□□□ 0.63
CFAP54Q96N23 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP54Q96N23 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CFAP54Q96N23 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.96■□□□□ 0.63
CFAP54Q96N23 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 AC112497.1-201ENST00000624824 639 ntBASIC18.95■□□□□ 0.62
CFAP54Q96N23 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 AL162741.1-201ENST00000565563 1558 ntBASIC18.95■□□□□ 0.62
CFAP54Q96N23 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 LINC00565-201ENST00000562710 2331 ntBASIC18.95■□□□□ 0.62
CFAP54Q96N23 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CFAP54Q96N23 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CFAP54Q96N23 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 AP000867.3-201ENST00000524675 377 ntBASIC18.94■□□□□ 0.62
CFAP54Q96N23 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 CA15P1-201ENST00000481698 905 ntBASIC18.94■□□□□ 0.62
CFAP54Q96N23 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 AC106730.1-201ENST00000566722 1090 ntBASIC18.94■□□□□ 0.62
CFAP54Q96N23 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.94■□□□□ 0.62
CFAP54Q96N23 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 AL137060.1-201ENST00000618151 2648 ntBASIC18.94■□□□□ 0.62
CFAP54Q96N23 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CFAP54Q96N23 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.94■□□□□ 0.62
CFAP54Q96N23 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms