Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PRICKLE1Q96MT3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 FSCN1P1-201ENST00000568912 1481 ntBASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 UNC93B2-201ENST00000285383 730 ntBASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 AC008040.2-201ENST00000461049 708 ntBASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRICKLE1Q96MT3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 KRT8P9-201ENST00000558927 1449 ntBASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 AL390955.1-201ENST00000428694 934 ntBASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 AFG3L1P-217ENST00000557444 2447 ntBASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.94■□□□□ 0.78
PRICKLE1Q96MT3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 AL160286.2-201ENST00000567150 934 ntBASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRICKLE1Q96MT3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 MIR1238-201ENST00000408483 83 ntBASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 AC011298.2-201ENST00000617989 482 ntBASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 TREX1-205ENST00000625293 1783 ntBASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRICKLE1Q96MT3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE1Q96MT3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE1Q96MT3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE1Q96MT3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PRICKLE1Q96MT3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE1Q96MT3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRICKLE1Q96MT3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms