Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPGRIP1Q96KN7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 AC087633.2-202ENST00000565166 1439 ntBASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 AC005521.1-201ENST00000393351 872 ntBASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 AF186192.3-201ENST00000583427 947 ntBASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPGRIP1Q96KN7 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 AC145285.6-201ENST00000604632 637 ntBASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 HTR7P1-201ENST00000538670 1336 ntBASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPGRIP1Q96KN7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 FAM197Y1-201ENST00000421178 764 ntBASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RPGRIP1Q96KN7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPGRIP1Q96KN7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms