Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
LRCH3Q96II8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.92■□□□□ 0.94
LRCH3Q96II8 AP000867.3-201ENST00000524675 377 ntBASIC20.92■□□□□ 0.94
LRCH3Q96II8 KRT18P58-201ENST00000527480 1120 ntBASIC20.92■□□□□ 0.94
LRCH3Q96II8 AC027796.2-201ENST00000575326 344 ntBASIC20.92■□□□□ 0.94
LRCH3Q96II8 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.92■□□□□ 0.94
LRCH3Q96II8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
LRCH3Q96II8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.92■□□□□ 0.94
LRCH3Q96II8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.92■□□□□ 0.94
LRCH3Q96II8 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LRCH3Q96II8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 MIR564-202ENST00000385049 94 ntBASIC20.91■□□□□ 0.94
LRCH3Q96II8 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 BX842568.4-201ENST00000421222 227 ntBASIC20.91■□□□□ 0.94
LRCH3Q96II8 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
LRCH3Q96II8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LRCH3Q96II8 AC005229.4-201ENST00000610085 2198 ntBASIC20.9■□□□□ 0.94
LRCH3Q96II8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH3Q96II8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
LRCH3Q96II8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.9■□□□□ 0.94
LRCH3Q96II8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.9■□□□□ 0.94
LRCH3Q96II8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH3Q96II8 Z85996.1-201ENST00000494644 937 ntBASIC20.9■□□□□ 0.94
LRCH3Q96II8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.9■□□□□ 0.94
LRCH3Q96II8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.9■□□□□ 0.94
LRCH3Q96II8 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.9■□□□□ 0.94
LRCH3Q96II8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH3Q96II8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.9■□□□□ 0.94
LRCH3Q96II8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH3Q96II8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LRCH3Q96II8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LRCH3Q96II8 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 PMS2P2-201ENST00000425039 1128 ntBASIC20.89■□□□□ 0.93
LRCH3Q96II8 AC005104.2-201ENST00000427818 678 ntBASIC20.89■□□□□ 0.93
LRCH3Q96II8 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 AL691403.2-201ENST00000618460 490 ntBASIC20.89■□□□□ 0.93
LRCH3Q96II8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.89■□□□□ 0.93
LRCH3Q96II8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LRCH3Q96II8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH3Q96II8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.88■□□□□ 0.93
LRCH3Q96II8 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH3Q96II8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH3Q96II8 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH3Q96II8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.88■□□□□ 0.93
LRCH3Q96II8 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH3Q96II8 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
LRCH3Q96II8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms