Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRC58Q96CX6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 AC016769.1-201ENST00000409132 1010 ntBASIC18.36■□□□□ 0.53
LRRC58Q96CX6 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 AL512353.2-201ENST00000448759 1962 ntBASIC18.36■□□□□ 0.53
LRRC58Q96CX6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 AC005332.8-201ENST00000622750 2735 ntBASIC18.36■□□□□ 0.53
LRRC58Q96CX6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.36■□□□□ 0.53
LRRC58Q96CX6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 SDHAP1-207ENST00000440850 2000 ntBASIC18.35■□□□□ 0.53
LRRC58Q96CX6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 IRX1P1-201ENST00000438849 1838 ntBASIC18.35■□□□□ 0.53
LRRC58Q96CX6 AC104417.2-201ENST00000562989 1793 ntBASIC18.35■□□□□ 0.53
LRRC58Q96CX6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
LRRC58Q96CX6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 GPX1P1-201ENST00000388829 606 ntBASIC18.34■□□□□ 0.53
LRRC58Q96CX6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 MIR6821-201ENST00000617625 74 ntBASIC18.34■□□□□ 0.53
LRRC58Q96CX6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 AC018470.1-201ENST00000624790 3129 ntBASIC18.34■□□□□ 0.53
LRRC58Q96CX6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC58Q96CX6 BICD1-207ENST00000551848 1962 ntBASIC18.33■□□□□ 0.53
LRRC58Q96CX6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC58Q96CX6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC58Q96CX6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC58Q96CX6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRC58Q96CX6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC58Q96CX6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 AL512625.2-201ENST00000417533 625 ntBASIC18.33■□□□□ 0.52
LRRC58Q96CX6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 AC231657.2-201ENST00000624556 255 ntBASIC18.33■□□□□ 0.52
LRRC58Q96CX6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC58Q96CX6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms