Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZNF428Q96B54 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZNF428Q96B54 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
ZNF428Q96B54 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 CYP2D8P-201ENST00000433633 1490 ntBASIC24.85■■□□□ 1.57
ZNF428Q96B54 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 MIR6786-201ENST00000616843 113 ntBASIC24.85■■□□□ 1.57
ZNF428Q96B54 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.85■■□□□ 1.57
ZNF428Q96B54 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
ZNF428Q96B54 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZNF428Q96B54 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZNF428Q96B54 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZNF428Q96B54 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZNF428Q96B54 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 AC010331.1-201ENST00000611423 582 ntBASIC24.84■■□□□ 1.57
ZNF428Q96B54 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
ZNF428Q96B54 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.84■■□□□ 1.57
ZNF428Q96B54 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 MMP23A-201ENST00000234610 1017 ntBASIC24.83■■□□□ 1.57
ZNF428Q96B54 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ZNF428Q96B54 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
ZNF428Q96B54 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZNF428Q96B54 ABBA01031674.1-201ENST00000635145 728 ntBASIC24.83■■□□□ 1.57
ZNF428Q96B54 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZNF428Q96B54 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZNF428Q96B54 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
ZNF428Q96B54 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC24.83■■□□□ 1.57
ZNF428Q96B54 AC116562.4-201ENST00000641316 2276 ntBASIC24.83■■□□□ 1.57
ZNF428Q96B54 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
ZNF428Q96B54 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.56
ZNF428Q96B54 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
ZNF428Q96B54 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC24.82■■□□□ 1.56
ZNF428Q96B54 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.82■■□□□ 1.56
ZNF428Q96B54 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC24.82■■□□□ 1.56
ZNF428Q96B54 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.82■■□□□ 1.56
ZNF428Q96B54 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.82■■□□□ 1.56
ZNF428Q96B54 AC026271.3-201ENST00000571884 352 ntBASIC24.82■■□□□ 1.56
ZNF428Q96B54 AC012306.2-201ENST00000609350 630 ntBASIC24.82■■□□□ 1.56
ZNF428Q96B54 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.82■■□□□ 1.56
ZNF428Q96B54 AL032819.2-201ENST00000624543 2162 ntBASIC24.82■■□□□ 1.56
ZNF428Q96B54 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
ZNF428Q96B54 SDHAP1-207ENST00000440850 2000 ntBASIC24.81■■□□□ 1.56
ZNF428Q96B54 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF428Q96B54 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 LINC01465-201ENST00000408887 1940 ntBASIC24.81■■□□□ 1.56
ZNF428Q96B54 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF428Q96B54 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF428Q96B54 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF428Q96B54 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
ZNF428Q96B54 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.81■■□□□ 1.56
ZNF428Q96B54 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.8■■□□□ 1.56
ZNF428Q96B54 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
ZNF428Q96B54 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms