Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 AL139384.1-201ENST00000612143 3047 ntBASIC17.58■□□□□ 0.4
HPS1Q92902 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
HPS1Q92902 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.58■□□□□ 0.4
HPS1Q92902 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 CYP2T1P-201ENST00000432607 1285 ntBASIC17.58■□□□□ 0.4
HPS1Q92902 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.58■□□□□ 0.4
HPS1Q92902 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.58■□□□□ 0.4
HPS1Q92902 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
HPS1Q92902 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.58■□□□□ 0.4
HPS1Q92902 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.58■□□□□ 0.4
HPS1Q92902 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HPS1Q92902 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.58■□□□□ 0.4
HPS1Q92902 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.58■□□□□ 0.4
HPS1Q92902 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.58■□□□□ 0.4
HPS1Q92902 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
HPS1Q92902 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.57■□□□□ 0.4
HPS1Q92902 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.57■□□□□ 0.4
HPS1Q92902 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.57■□□□□ 0.4
HPS1Q92902 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
HPS1Q92902 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.57■□□□□ 0.4
HPS1Q92902 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.57■□□□□ 0.4
HPS1Q92902 AL512625.2-201ENST00000417533 625 ntBASIC17.57■□□□□ 0.4
HPS1Q92902 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HPS1Q92902 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.57■□□□□ 0.4
HPS1Q92902 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
HPS1Q92902 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.57■□□□□ 0.4
HPS1Q92902 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HPS1Q92902 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HPS1Q92902 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HPS1Q92902 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.56■□□□□ 0.4
HPS1Q92902 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.56■□□□□ 0.4
HPS1Q92902 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HPS1Q92902 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HPS1Q92902 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.56■□□□□ 0.4
HPS1Q92902 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HPS1Q92902 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.56■□□□□ 0.4
HPS1Q92902 AL162412.1-201ENST00000567129 965 ntBASIC17.56■□□□□ 0.4
HPS1Q92902 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.56■□□□□ 0.4
HPS1Q92902 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.56■□□□□ 0.4
HPS1Q92902 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 NOC2LP2-201ENST00000407594 1944 ntBASIC17.56■□□□□ 0.4
HPS1Q92902 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.56■□□□□ 0.4
HPS1Q92902 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HPS1Q92902 RBM17P2-201ENST00000616397 1405 ntBASIC17.55■□□□□ 0.4
HPS1Q92902 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.55■□□□□ 0.4
HPS1Q92902 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 AC068880.1-201ENST00000507289 2297 ntBASIC17.55■□□□□ 0.4
HPS1Q92902 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HPS1Q92902 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
HPS1Q92902 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 PRORSD1P-202ENST00000563365 2154 ntBASIC17.55■□□□□ 0.4
HPS1Q92902 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.55■□□□□ 0.4
HPS1Q92902 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.55■□□□□ 0.4
HPS1Q92902 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.55■□□□□ 0.4
HPS1Q92902 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.55■□□□□ 0.4
HPS1Q92902 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.55■□□□□ 0.4
HPS1Q92902 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC17.55■□□□□ 0.4
HPS1Q92902 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HPS1Q92902 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 MKRN4P-201ENST00000444706 1521 ntBASIC17.55■□□□□ 0.4
HPS1Q92902 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HPS1Q92902 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.55■□□□□ 0.4
HPS1Q92902 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms