Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT9Q92600 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.79■□□□□ 0.44
CNOT9Q92600 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNOT9Q92600 AC104417.2-201ENST00000562989 1793 ntBASIC17.79■□□□□ 0.44
CNOT9Q92600 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CNOT9Q92600 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CNOT9Q92600 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.78■□□□□ 0.44
CNOT9Q92600 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CNOT9Q92600 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNOT9Q92600 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT9Q92600 ESRRAP1-201ENST00000400596 1257 ntBASIC17.78■□□□□ 0.44
CNOT9Q92600 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT9Q92600 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT9Q92600 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNOT9Q92600 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.78■□□□□ 0.44
CNOT9Q92600 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.78■□□□□ 0.44
CNOT9Q92600 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNOT9Q92600 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT9Q92600 AC120498.9-201ENST00000339021 3867 ntBASIC17.77■□□□□ 0.44
CNOT9Q92600 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.77■□□□□ 0.44
CNOT9Q92600 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 NBPF21P-201ENST00000425093 1451 ntBASIC17.77■□□□□ 0.44
CNOT9Q92600 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT9Q92600 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CNOT9Q92600 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.77■□□□□ 0.44
CNOT9Q92600 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.77■□□□□ 0.44
CNOT9Q92600 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
CNOT9Q92600 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNOT9Q92600 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CNOT9Q92600 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT9Q92600 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT9Q92600 SDHAP1-207ENST00000440850 2000 ntBASIC17.77■□□□□ 0.43
CNOT9Q92600 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
CNOT9Q92600 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT9Q92600 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CNOT9Q92600 TEX21P-204ENST00000641479 1693 ntBASIC17.77■□□□□ 0.43
CNOT9Q92600 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT9Q92600 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT9Q92600 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT9Q92600 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CNOT9Q92600 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT9Q92600 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT9Q92600 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.76■□□□□ 0.43
CNOT9Q92600 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT9Q92600 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.76■□□□□ 0.43
CNOT9Q92600 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CNOT9Q92600 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.76■□□□□ 0.43
CNOT9Q92600 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.76■□□□□ 0.43
CNOT9Q92600 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
CNOT9Q92600 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CNOT9Q92600 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT9Q92600 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT9Q92600 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CNOT9Q92600 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT9Q92600 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CNOT9Q92600 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms