Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RAB40AQ8WXH6 AC087633.2-202ENST00000565166 1439 ntBASIC16.96■□□□□ 0.3
RAB40AQ8WXH6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.96■□□□□ 0.3
RAB40AQ8WXH6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 CYP21A1P-202ENST00000354927 1481 ntBASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAB40AQ8WXH6 AC007613.1-201ENST00000572811 2597 ntBASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 ABHD17AP1-201ENST00000358206 933 ntBASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 RNA5SP413-201ENST00000516373 109 ntBASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 AC083880.1-201ENST00000608266 535 ntBASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAB40AQ8WXH6 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 PTBP1P-201ENST00000554374 1601 ntBASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 TSPY20P-201ENST00000450910 630 ntBASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAB40AQ8WXH6 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40AQ8WXH6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40AQ8WXH6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40AQ8WXH6 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB40AQ8WXH6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms