Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC007967.2-201ENST00000432613 625 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 C1QL1P1-201ENST00000568105 661 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AJ011932.1-201ENST00000621707 465 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 ABCB10P4-201ENST00000566803 2184 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 IGHV3-71-201ENST00000523324 359 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 MTDHP5-201ENST00000598980 586 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 STK25-204ENST00000405585 1643 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AL139400.1-201ENST00000366220 510 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 HILS1-202ENST00000545329 423 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AC005336.2-201ENST00000593183 939 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AC022211.4-201ENST00000625094 2161 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 POM121L3P-201ENST00000419331 1163 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 MIR4525-201ENST00000580000 75 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 RN7SL204P-201ENST00000582831 262 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AP006587.1-201ENST00000534129 1502 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AL023284.2-201ENST00000405850 579 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 MCCD1P2-201ENST00000423228 335 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AC093512.1-201ENST00000617969 520 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 AL139125.2-201ENST00000623134 1869 ntBASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SYNE2Q8WXH0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC090616.6-201ENST00000582640 721 ntBASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC7.84□□□□□ -1.15
SYNE2Q8WXH0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms