Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AL031432.5-201ENST00000641059 760 ntBASIC30.06■■■□□ 2.4
CASKIN1Q8WXD9 LINC01006-201ENST00000333319 2292 ntBASIC30.06■■■□□ 2.4
CASKIN1Q8WXD9 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC30.06■■■□□ 2.4
CASKIN1Q8WXD9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC30.06■■■□□ 2.4
CASKIN1Q8WXD9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 Telomerase-vert.1-201ENST00000363312 438 ntBASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 AL671277.2-201ENST00000458060 996 ntBASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 AP000550.4-202ENST00000639755 178 ntBASIC30.05■■■□□ 2.4
CASKIN1Q8WXD9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 UPK3BP1-201ENST00000428678 509 ntBASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 DBP-204ENST00000599385 709 ntTSL 3 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC30.04■■■□□ 2.4
CASKIN1Q8WXD9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 AP000523.1-201ENST00000398242 1049 ntBASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 SPDYE15P-201ENST00000424157 909 ntBASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 CR769767.2-201ENST00000622735 460 ntBASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CASKIN1Q8WXD9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 NMU-205ENST00000511469 756 ntTSL 3 BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 CD81-212ENST00000526072 1172 ntTSL 5 BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 HYMAI.1-201ENST00000620949 238 ntBASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 AL157384.1-201ENST00000445995 2473 ntBASIC30.02■■■□□ 2.4
CASKIN1Q8WXD9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
CASKIN1Q8WXD9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC30.01■■■□□ 2.4
CASKIN1Q8WXD9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC30.01■■■□□ 2.4
CASKIN1Q8WXD9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC30.01■■■□□ 2.4
CASKIN1Q8WXD9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 GAS2L1P1-201ENST00000420145 1480 ntBASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CASKIN1Q8WXD9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms