Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF139Q8WU17 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF139Q8WU17 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
RNF139Q8WU17 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF139Q8WU17 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.27■□□□□ 0.84
RNF139Q8WU17 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 NUDT16P1-203ENST00000513809 620 ntBASIC20.27■□□□□ 0.84
RNF139Q8WU17 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 AP003071.4-201ENST00000562276 1284 ntBASIC20.27■□□□□ 0.84
RNF139Q8WU17 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.27■□□□□ 0.84
RNF139Q8WU17 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF139Q8WU17 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RNF139Q8WU17 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RNF139Q8WU17 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF139Q8WU17 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF139Q8WU17 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF139Q8WU17 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.25■□□□□ 0.83
RNF139Q8WU17 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.25■□□□□ 0.83
RNF139Q8WU17 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF139Q8WU17 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF139Q8WU17 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RNF139Q8WU17 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RNF139Q8WU17 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 AC004980.1-204ENST00000429707 299 ntBASIC20.24■□□□□ 0.83
RNF139Q8WU17 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.24■□□□□ 0.83
RNF139Q8WU17 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms