Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 CD99P1-205ENST00000527459 561 ntBASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 PNMA6B-201ENST00000538162 1200 ntBASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CCHCR1Q8TD31 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 AC005829.2-201ENST00000571422 1056 ntBASIC20.08■□□□□ 0.81
CCHCR1Q8TD31 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CCHCR1Q8TD31 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 AL138781.2-201ENST00000617896 1843 ntBASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.07■□□□□ 0.8
CCHCR1Q8TD31 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCHCR1Q8TD31 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms