Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 AIRN-201ENST00000601203 4374 ntBASIC20.46■□□□□ 0.87
UBA3Q8TBC4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 AC012618.2-201ENST00000428058 849 ntBASIC20.46■□□□□ 0.87
UBA3Q8TBC4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 AL160286.2-201ENST00000567150 934 ntBASIC20.46■□□□□ 0.87
UBA3Q8TBC4 AL049637.2-201ENST00000641778 930 ntBASIC20.46■□□□□ 0.87
UBA3Q8TBC4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.46■□□□□ 0.87
UBA3Q8TBC4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
UBA3Q8TBC4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
UBA3Q8TBC4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 AC093827.2-201ENST00000512654 315 ntBASIC20.45■□□□□ 0.86
UBA3Q8TBC4 CD177P1-201ENST00000606252 935 ntBASIC20.45■□□□□ 0.86
UBA3Q8TBC4 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.45■□□□□ 0.86
UBA3Q8TBC4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
UBA3Q8TBC4 KRT16P1-201ENST00000399124 1418 ntBASIC20.44■□□□□ 0.86
UBA3Q8TBC4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 AC004980.1-204ENST00000429707 299 ntBASIC20.44■□□□□ 0.86
UBA3Q8TBC4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBA3Q8TBC4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 MIR718-201ENST00000390190 70 ntBASIC20.43■□□□□ 0.86
UBA3Q8TBC4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 AC131212.4-201ENST00000623606 975 ntBASIC20.43■□□□□ 0.86
UBA3Q8TBC4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 AL032819.2-201ENST00000624543 2162 ntBASIC20.43■□□□□ 0.86
UBA3Q8TBC4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBA3Q8TBC4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
UBA3Q8TBC4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms