Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HMGCLL1Q8TB92 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGCLL1Q8TB92 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 TUBB8P6-201ENST00000436895 1288 ntBASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 UBE2SP1-201ENST00000450587 669 ntBASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 CROCCP3-202ENST00000420820 1947 ntBASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGCLL1Q8TB92 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 AL138781.2-201ENST00000617896 1843 ntBASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 FAM197Y4-202ENST00000622692 608 ntBASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGCLL1Q8TB92 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HMGCLL1Q8TB92 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms