Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SIMC1Q8NDZ2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 LINC01465-201ENST00000408887 1940 ntBASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 RPPH1-201ENST00000516869 333 ntBASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SIMC1Q8NDZ2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 AC005332.7-201ENST00000614046 2005 ntBASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SIMC1Q8NDZ2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 AC005082.1-201ENST00000413042 2259 ntBASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 AL359736.2-201ENST00000621992 437 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms