Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 TNXA-203ENST00000507684 2038 ntBASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 TEX21P-204ENST00000641479 1693 ntBASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 PRKY-204ENST00000533551 1019 ntBASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LSMEM1Q8N8F7 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LSMEM1Q8N8F7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.64■□□□□ 0.42
LSMEM1Q8N8F7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
LSMEM1Q8N8F7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
LSMEM1Q8N8F7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 SDHAP1-207ENST00000440850 2000 ntBASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 AP003097.1-201ENST00000530657 1135 ntBASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms