Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 SPDYE13P-201ENST00000445314 798 ntBASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.82■■□□□ 1.88
ARHGEF28Q8N1W1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 FAM86EP-206ENST00000510506 987 ntBASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC26.81■■□□□ 1.88
ARHGEF28Q8N1W1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 GAS2L1P1-201ENST00000420145 1480 ntBASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 CR769767.2-201ENST00000622735 460 ntBASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ARHGEF28Q8N1W1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 TSPY21P-201ENST00000433481 731 ntBASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 VENTXP5-201ENST00000523979 775 ntBASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 DBP-204ENST00000599385 709 ntTSL 3 BASIC26.79■■□□□ 1.88
ARHGEF28Q8N1W1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 AP000523.1-201ENST00000398242 1049 ntBASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ARHGEF28Q8N1W1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 STARP1-201ENST00000397973 869 ntBASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 MED25-212ENST00000618715 1467 ntTSL 5 BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ARHGEF28Q8N1W1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC26.76■■□□□ 1.88
ARHGEF28Q8N1W1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ARHGEF28Q8N1W1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms