Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 AL512408.1-201ENST00000569378 2000 ntBASIC20.9■□□□□ 0.94
VPS52Q8N1B4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS52Q8N1B4 RCC2P6-201ENST00000526625 1557 ntBASIC20.89■□□□□ 0.94
VPS52Q8N1B4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VPS52Q8N1B4 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.89■□□□□ 0.94
VPS52Q8N1B4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS52Q8N1B4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 INGX-201ENST00000359239 846 ntBASIC20.89■□□□□ 0.93
VPS52Q8N1B4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 WWOX-216ENST00000569818 525 ntBASIC20.89■□□□□ 0.93
VPS52Q8N1B4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 AP000692.2-201ENST00000608391 879 ntBASIC20.89■□□□□ 0.93
VPS52Q8N1B4 AC006011.2-201ENST00000621313 1158 ntBASIC20.89■□□□□ 0.93
VPS52Q8N1B4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS52Q8N1B4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 AL162377.1-201ENST00000618844 1793 ntBASIC20.88■□□□□ 0.93
VPS52Q8N1B4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 SMG8-203ENST00000578922 2178 ntBASIC20.88■□□□□ 0.93
VPS52Q8N1B4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 AC087388.1-201ENST00000571370 1112 ntBASIC20.88■□□□□ 0.93
VPS52Q8N1B4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 AC011298.2-201ENST00000617989 482 ntBASIC20.88■□□□□ 0.93
VPS52Q8N1B4 HLA-A-209ENST00000638375 975 ntBASIC20.88■□□□□ 0.93
VPS52Q8N1B4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.88■□□□□ 0.93
VPS52Q8N1B4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 FAM87A-204ENST00000613235 858 ntBASIC20.87■□□□□ 0.93
VPS52Q8N1B4 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 AL391422.3-201ENST00000603791 2761 ntBASIC20.87■□□□□ 0.93
VPS52Q8N1B4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS52Q8N1B4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms