Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.48■□□□□ 0.39
RP1L1Q8IWN7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 AL671277.2-201ENST00000458060 996 ntBASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 FDX1P1-201ENST00000449115 551 ntBASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 MIR3180-1-201ENST00000580374 94 ntBASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 MIR3180-3-201ENST00000584616 94 ntBASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RP1L1Q8IWN7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 MIR3652-201ENST00000579335 131 ntBASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 AC141257.4-201ENST00000634557 245 ntBASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 AC136944.6-201ENST00000634818 245 ntBASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 AL136038.3-201ENST00000561909 1096 ntBASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.46■□□□□ 0.39
RP1L1Q8IWN7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
RP1L1Q8IWN7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
RP1L1Q8IWN7 IER3-202ENST00000376377 1350 ntBASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 CA15P1-201ENST00000481698 905 ntBASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RP1L1Q8IWN7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 VENTXP5-201ENST00000523979 775 ntBASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RP1L1Q8IWN7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms