Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 AP003097.1-201ENST00000530657 1135 ntBASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 AC008403.3-201ENST00000598924 454 ntBASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CDKL3Q8IVW4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CDKL3Q8IVW4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDKL3Q8IVW4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
CDKL3Q8IVW4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 NBPF21P-201ENST00000425093 1451 ntBASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.8■□□□□ 0.76
CDKL3Q8IVW4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDKL3Q8IVW4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms