Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.16■□□□□ 0.34
LRRC28Q86X40 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 AC091874.3-201ENST00000512672 1195 ntBASIC17.16■□□□□ 0.34
LRRC28Q86X40 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRRC28Q86X40 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.16■□□□□ 0.34
LRRC28Q86X40 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 DUSP5P2-201ENST00000426873 1033 ntBASIC17.15■□□□□ 0.34
LRRC28Q86X40 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 MYC-209ENST00000641252 345 ntBASIC17.15■□□□□ 0.34
LRRC28Q86X40 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LRRC28Q86X40 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LRRC28Q86X40 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
LRRC28Q86X40 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 CD99P1-205ENST00000527459 561 ntBASIC17.14■□□□□ 0.33
LRRC28Q86X40 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.14■□□□□ 0.33
LRRC28Q86X40 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRRC28Q86X40 AC090340.1-201ENST00000620778 4980 ntBASIC17.14■□□□□ 0.33
LRRC28Q86X40 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 AC020916.1-201ENST00000587762 1774 ntBASIC17.13■□□□□ 0.33
LRRC28Q86X40 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
LRRC28Q86X40 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRRC28Q86X40 PGM5P4-201ENST00000421970 445 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms