Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 AC140113.3-201ENST00000605663 199 ntBASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 TUBB8P6-201ENST00000436895 1288 ntBASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 AP002383.4-201ENST00000442518 975 ntBASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 AL031008.1-201ENST00000619963 541 ntBASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 PHGDH-210ENST00000641115 1638 ntBASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
VPS13BQ7Z7G8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 IFNL4P1-201ENST00000607083 540 ntBASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 AC112907.3-201ENST00000577781 2400 ntBASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
VPS13BQ7Z7G8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13BQ7Z7G8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms