Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 AC005181.1-201ENST00000604782 1256 ntBASIC17.44■□□□□ 0.38
SHFQ7M4L6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
SHFQ7M4L6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.44■□□□□ 0.38
SHFQ7M4L6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 KRT17P1-201ENST00000399211 1546 ntBASIC17.43■□□□□ 0.38
SHFQ7M4L6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 LSM12P1-201ENST00000411836 588 ntBASIC17.43■□□□□ 0.38
SHFQ7M4L6 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SHFQ7M4L6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SHFQ7M4L6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 HCG11-201ENST00000411553 5696 ntBASIC17.42■□□□□ 0.38
SHFQ7M4L6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 AC018553.1-201ENST00000616682 1458 ntBASIC17.42■□□□□ 0.38
SHFQ7M4L6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SHFQ7M4L6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.42■□□□□ 0.38
SHFQ7M4L6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 AC093787.1-201ENST00000450396 207 ntBASIC17.41■□□□□ 0.38
SHFQ7M4L6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 AC133552.2-202ENST00000575694 574 ntBASIC17.41■□□□□ 0.38
SHFQ7M4L6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 AC141586.3-201ENST00000562166 1838 ntBASIC17.41■□□□□ 0.38
SHFQ7M4L6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SHFQ7M4L6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.41■□□□□ 0.38
SHFQ7M4L6 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SHFQ7M4L6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.4■□□□□ 0.38
SHFQ7M4L6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms