Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.54■□□□□ 0.56
RNF44Q7L0R7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.53■□□□□ 0.56
RNF44Q7L0R7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 AL355355.2-201ENST00000442321 338 ntBASIC18.53■□□□□ 0.56
RNF44Q7L0R7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RNF44Q7L0R7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 PCDHAC2-203ENST00000615316 3011 ntBASIC18.52■□□□□ 0.56
RNF44Q7L0R7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 AP003071.4-201ENST00000562276 1284 ntBASIC18.52■□□□□ 0.56
RNF44Q7L0R7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.52■□□□□ 0.56
RNF44Q7L0R7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF44Q7L0R7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF44Q7L0R7 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF44Q7L0R7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF44Q7L0R7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.55
RNF44Q7L0R7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF44Q7L0R7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.52■□□□□ 0.55
RNF44Q7L0R7 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 Z85996.1-201ENST00000494644 937 ntBASIC18.51■□□□□ 0.55
RNF44Q7L0R7 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 AC116562.2-201ENST00000507042 360 ntBASIC18.51■□□□□ 0.55
RNF44Q7L0R7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 AL160286.2-201ENST00000567150 934 ntBASIC18.51■□□□□ 0.55
RNF44Q7L0R7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF44Q7L0R7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 ZNF815P-204ENST00000434898 1737 ntBASIC18.5■□□□□ 0.55
RNF44Q7L0R7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 REXO1L10P-201ENST00000615707 1290 ntBASIC18.5■□□□□ 0.55
RNF44Q7L0R7 REXO1L12P-201ENST00000622156 912 ntBASIC18.5■□□□□ 0.55
RNF44Q7L0R7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF44Q7L0R7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms