Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC23.57■■□□□ 1.36
CASC1Q6TDU7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CASC1Q6TDU7 AC020763.4-201ENST00000623414 4170 ntBASIC23.57■■□□□ 1.36
CASC1Q6TDU7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CASC1Q6TDU7 TEX21P-204ENST00000641479 1693 ntBASIC23.57■■□□□ 1.36
CASC1Q6TDU7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 SOX15-203ENST00000570788 1093 ntBASIC23.56■■□□□ 1.36
CASC1Q6TDU7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 AL121829.2-201ENST00000620908 328 ntBASIC23.56■■□□□ 1.36
CASC1Q6TDU7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CASC1Q6TDU7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CASC1Q6TDU7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
CASC1Q6TDU7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 AL161938.1-201ENST00000569833 2180 ntBASIC23.53■■□□□ 1.36
CASC1Q6TDU7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 TUBB8P6-201ENST00000436895 1288 ntBASIC23.53■■□□□ 1.36
CASC1Q6TDU7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC23.53■■□□□ 1.36
CASC1Q6TDU7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms