Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 LINC01521-201ENST00000504184 1943 ntBASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
H3F3CQ6NXT2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 KRT8P41-201ENST00000533985 1514 ntBASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 AC073508.3-201ENST00000619697 1419 ntBASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
H3F3CQ6NXT2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 AC005521.1-201ENST00000393351 872 ntBASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 TMPOP1-202ENST00000424642 1267 ntBASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 MFAP1P1-201ENST00000442257 1255 ntBASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 SLC25A3P1-201ENST00000443844 931 ntBASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 AC128688.1-201ENST00000487626 519 ntBASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
H3F3CQ6NXT2 AL157384.1-201ENST00000445995 2473 ntBASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 RN7SL850P-201ENST00000579959 291 ntBASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 AC010331.1-201ENST00000611423 582 ntBASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.82■□□□□ 0.44
H3F3CQ6NXT2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 LINC01465-201ENST00000408887 1940 ntBASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 TERF1P1-201ENST00000311003 1181 ntBASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.81■□□□□ 0.44
H3F3CQ6NXT2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms