Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AP005242.2-201ENST00000580065 1175 ntBASIC17.42■□□□□ 0.38
RTL6Q6ICC9 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.42■□□□□ 0.38
RTL6Q6ICC9 AL445228.2-201ENST00000605589 952 ntBASIC17.42■□□□□ 0.38
RTL6Q6ICC9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 DGCR10-201ENST00000609839 495 ntBASIC17.42■□□□□ 0.38
RTL6Q6ICC9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RTL6Q6ICC9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 AC073508.3-201ENST00000619697 1419 ntBASIC17.41■□□□□ 0.38
RTL6Q6ICC9 AC007952.6-201ENST00000573168 2673 ntBASIC17.41■□□□□ 0.38
RTL6Q6ICC9 AC003957.1-201ENST00000625108 2673 ntBASIC17.41■□□□□ 0.38
RTL6Q6ICC9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 TERF1P1-201ENST00000311003 1181 ntBASIC17.41■□□□□ 0.38
RTL6Q6ICC9 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 KRT18P57-201ENST00000443599 1254 ntBASIC17.41■□□□□ 0.38
RTL6Q6ICC9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 AC130371.2-201ENST00000619443 611 ntBASIC17.41■□□□□ 0.38
RTL6Q6ICC9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RTL6Q6ICC9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 AL512408.1-201ENST00000569378 2000 ntBASIC17.4■□□□□ 0.38
RTL6Q6ICC9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 SLC25A3P1-201ENST00000443844 931 ntBASIC17.4■□□□□ 0.38
RTL6Q6ICC9 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 AC008040.2-201ENST00000461049 708 ntBASIC17.4■□□□□ 0.38
RTL6Q6ICC9 AC097488.1-201ENST00000507834 756 ntBASIC17.4■□□□□ 0.38
RTL6Q6ICC9 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 AIRN-201ENST00000601203 4374 ntBASIC17.4■□□□□ 0.38
RTL6Q6ICC9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 RCC2P6-201ENST00000526625 1557 ntBASIC17.4■□□□□ 0.38
RTL6Q6ICC9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RTL6Q6ICC9 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTL6Q6ICC9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
RTL6Q6ICC9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RTL6Q6ICC9 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.39■□□□□ 0.37
RTL6Q6ICC9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RTL6Q6ICC9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RTL6Q6ICC9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.39■□□□□ 0.37
RTL6Q6ICC9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms