Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TTC39BQ5VTQ0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 AL596275.1-201ENST00000423464 877 ntBASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 SNORA78-201ENST00000459373 127 ntBASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 MIR4785-201ENST00000585005 73 ntBASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.1■□□□□ 0.81
TTC39BQ5VTQ0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 CD177P1-201ENST00000606252 935 ntBASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 AL445675.2-201ENST00000620291 557 ntBASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC39BQ5VTQ0 AC093484.2-201ENST00000580996 2166 ntBASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 KRT17P2-201ENST00000300992 1314 ntBASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC39BQ5VTQ0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 KRT16P1-201ENST00000399124 1418 ntBASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC39BQ5VTQ0 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms