Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
CDC42BPAQ5VT25 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC29.3■■■□□ 2.28
CDC42BPAQ5VT25 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC29.29■■■□□ 2.28
CDC42BPAQ5VT25 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 BUB3-202ENST00000368859 667 ntTSL 3 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 GPAT2P1-201ENST00000444924 1672 ntBASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 ZNF815P-204ENST00000434898 1737 ntBASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 GABARAPL3-202ENST00000624044 1851 ntBASIC29.28■■■□□ 2.28
CDC42BPAQ5VT25 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 PALM-208ENST00000592155 2272 ntTSL 4 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC29.27■■■□□ 2.28
CDC42BPAQ5VT25 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.28
CDC42BPAQ5VT25 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 GOLGA6L5P-202ENST00000515341 1828 ntBASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC29.26■■■□□ 2.27
CDC42BPAQ5VT25 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 TPM4P1-201ENST00000436100 807 ntBASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 PP7080-204ENST00000510714 601 ntTSL 3 BASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 AC140113.3-201ENST00000605663 199 ntBASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 FGF14-AS2-201ENST00000606448 1074 ntBASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 NDUFV2-AS1-203ENST00000608008 779 ntBASIC29.25■■■□□ 2.27
CDC42BPAQ5VT25 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 RASA4DP-201ENST00000460726 1199 ntBASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC29.24■■■□□ 2.27
CDC42BPAQ5VT25 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms