Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.22■□□□□ 0.67
LDLRAP1Q5SW96 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 HLA-A-209ENST00000638375 975 ntBASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 AC066615.1-201ENST00000640911 628 ntBASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LDLRAP1Q5SW96 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 RPS2P4-201ENST00000476944 856 ntBASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 AL049637.2-201ENST00000641778 930 ntBASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
LDLRAP1Q5SW96 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 KRT16P1-201ENST00000399124 1418 ntBASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.19■□□□□ 0.66
LDLRAP1Q5SW96 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 ZNF815P-204ENST00000434898 1737 ntBASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 AC093827.2-201ENST00000512654 315 ntBASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 AC131212.4-201ENST00000623606 975 ntBASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 CR392000.1-201ENST00000624770 1228 ntBASIC19.18■□□□□ 0.66
LDLRAP1Q5SW96 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms