Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01556Q5JQF7 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01556Q5JQF7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LINC01556Q5JQF7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
LINC01556Q5JQF7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC13.14□□□□□ -0.31
LINC01556Q5JQF7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 HCG11-201ENST00000411553 5696 ntBASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 AC104417.2-201ENST00000562989 1793 ntBASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 FAM197Y1-201ENST00000421178 764 ntBASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 AC004980.1-204ENST00000429707 299 ntBASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 AC093827.2-201ENST00000512654 315 ntBASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 MIR4785-201ENST00000585005 73 ntBASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LINC01556Q5JQF7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 AL158211.5-201ENST00000623583 2518 ntBASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
LINC01556Q5JQF7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 AL355355.2-201ENST00000442321 338 ntBASIC13.11□□□□□ -0.31
LINC01556Q5JQF7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms