Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.99■■□□□ 1.11
CCNA1P78396 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCNA1P78396 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.98■■□□□ 1.11
CCNA1P78396 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CCNA1P78396 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNA1P78396 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.98■■□□□ 1.11
CCNA1P78396 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNA1P78396 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNA1P78396 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.98■■□□□ 1.11
CCNA1P78396 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.98■■□□□ 1.11
CCNA1P78396 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNA1P78396 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNA1P78396 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
CCNA1P78396 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNA1P78396 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNA1P78396 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNA1P78396 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNA1P78396 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNA1P78396 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNA1P78396 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNA1P78396 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNA1P78396 AL450487.1-201ENST00000426799 995 ntBASIC21.97■■□□□ 1.11
CCNA1P78396 DUSP5P1-201ENST00000441325 1139 ntBASIC21.97■■□□□ 1.11
CCNA1P78396 GCSHP2-201ENST00000560971 527 ntBASIC21.97■■□□□ 1.11
CCNA1P78396 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNA1P78396 AL121894.2-201ENST00000602977 491 ntBASIC21.97■■□□□ 1.11
CCNA1P78396 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNA1P78396 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNA1P78396 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNA1P78396 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNA1P78396 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CCNA1P78396 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CCNA1P78396 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNA1P78396 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CCNA1P78396 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNA1P78396 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNA1P78396 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.96■■□□□ 1.11
CCNA1P78396 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNA1P78396 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNA1P78396 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
CCNA1P78396 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNA1P78396 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNA1P78396 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CCNA1P78396 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNA1P78396 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CCNA1P78396 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNA1P78396 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CCNA1P78396 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CCNA1P78396 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.95■■□□□ 1.1
CCNA1P78396 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNA1P78396 AC083849.1-201ENST00000615227 514 ntBASIC21.95■■□□□ 1.1
CCNA1P78396 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNA1P78396 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNA1P78396 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNA1P78396 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNA1P78396 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 LINC01311-201ENST00000565162 1445 ntBASIC21.95■■□□□ 1.1
CCNA1P78396 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNA1P78396 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNA1P78396 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
CCNA1P78396 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 AL691432.2-201ENST00000607222 2038 ntBASIC21.94■■□□□ 1.1
CCNA1P78396 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNA1P78396 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.94■■□□□ 1.1
CCNA1P78396 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNA1P78396 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNA1P78396 GAD2-202ENST00000376248 680 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms