Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PRAMEP78395 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
PRAMEP78395 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRAMEP78395 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEP78395 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEP78395 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEP78395 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRAMEP78395 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.44■□□□□ 0.7
PRAMEP78395 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
PRAMEP78395 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.44■□□□□ 0.7
PRAMEP78395 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEP78395 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.44■□□□□ 0.7
PRAMEP78395 AC069544.1-201ENST00000609399 999 ntBASIC19.44■□□□□ 0.7
PRAMEP78395 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.44■□□□□ 0.7
PRAMEP78395 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.44■□□□□ 0.7
PRAMEP78395 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEP78395 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRAMEP78395 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.44■□□□□ 0.7
PRAMEP78395 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRAMEP78395 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PRAMEP78395 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.44■□□□□ 0.7
PRAMEP78395 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRAMEP78395 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEP78395 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PRAMEP78395 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEP78395 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PRAMEP78395 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEP78395 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.43■□□□□ 0.7
PRAMEP78395 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEP78395 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEP78395 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEP78395 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.43■□□□□ 0.7
PRAMEP78395 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEP78395 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.43■□□□□ 0.7
PRAMEP78395 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.43■□□□□ 0.7
PRAMEP78395 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEP78395 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PRAMEP78395 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEP78395 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PRAMEP78395 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.43■□□□□ 0.7
PRAMEP78395 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEP78395 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
PRAMEP78395 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEP78395 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEP78395 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEP78395 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEP78395 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEP78395 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PRAMEP78395 ESRRAP1-201ENST00000400596 1257 ntBASIC19.42■□□□□ 0.7
PRAMEP78395 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEP78395 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.42■□□□□ 0.7
PRAMEP78395 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.42■□□□□ 0.7
PRAMEP78395 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEP78395 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEP78395 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.42■□□□□ 0.7
PRAMEP78395 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PRAMEP78395 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PRAMEP78395 NBPF21P-201ENST00000425093 1451 ntBASIC19.41■□□□□ 0.7
PRAMEP78395 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PRAMEP78395 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PRAMEP78395 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PRAMEP78395 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.41■□□□□ 0.7
PRAMEP78395 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms