Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RPS4XP62701 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.44■□□□□ 0.38
RPS4XP62701 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPS4XP62701 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RPS4XP62701 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RPS4XP62701 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RPS4XP62701 AC004408.2-201ENST00000623613 2777 ntBASIC17.43■□□□□ 0.38
RPS4XP62701 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 AC093503.3-201ENST00000624917 2352 ntBASIC17.43■□□□□ 0.38
RPS4XP62701 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RPS4XP62701 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.43■□□□□ 0.38
RPS4XP62701 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.43■□□□□ 0.38
RPS4XP62701 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.43■□□□□ 0.38
RPS4XP62701 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.43■□□□□ 0.38
RPS4XP62701 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.43■□□□□ 0.38
RPS4XP62701 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPS4XP62701 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
RPS4XP62701 SDHAP1-207ENST00000440850 2000 ntBASIC17.43■□□□□ 0.38
RPS4XP62701 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.43■□□□□ 0.38
RPS4XP62701 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RPS4XP62701 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPS4XP62701 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4XP62701 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4XP62701 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.42■□□□□ 0.38
RPS4XP62701 AC233263.1-201ENST00000578059 224 ntBASIC17.42■□□□□ 0.38
RPS4XP62701 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4XP62701 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.42■□□□□ 0.38
RPS4XP62701 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4XP62701 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
RPS4XP62701 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RPS4XP62701 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
RPS4XP62701 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.42■□□□□ 0.38
RPS4XP62701 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS4XP62701 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS4XP62701 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS4XP62701 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4XP62701 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS4XP62701 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.41■□□□□ 0.38
RPS4XP62701 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4XP62701 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.41■□□□□ 0.38
RPS4XP62701 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS4XP62701 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.41■□□□□ 0.38
RPS4XP62701 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.41■□□□□ 0.38
RPS4XP62701 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.41■□□□□ 0.38
RPS4XP62701 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4XP62701 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4XP62701 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4XP62701 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4XP62701 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RPS4XP62701 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS4XP62701 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.4■□□□□ 0.38
RPS4XP62701 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RPS4XP62701 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.4■□□□□ 0.38
RPS4XP62701 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RPS4XP62701 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.4■□□□□ 0.38
RPS4XP62701 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 MIR4497-201ENST00000583208 89 ntBASIC17.4■□□□□ 0.38
RPS4XP62701 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms