Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
FOXG1P55316 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXG1P55316 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.95■□□□□ 0.3
FOXG1P55316 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.95■□□□□ 0.3
FOXG1P55316 BX088651.1-201ENST00000540551 451 ntBASIC16.95■□□□□ 0.3
FOXG1P55316 AC026271.3-201ENST00000571884 352 ntBASIC16.95■□□□□ 0.3
FOXG1P55316 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.95■□□□□ 0.3
FOXG1P55316 AC011298.2-201ENST00000617989 482 ntBASIC16.95■□□□□ 0.3
FOXG1P55316 AC130371.2-201ENST00000619443 611 ntBASIC16.95■□□□□ 0.3
FOXG1P55316 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
FOXG1P55316 KRT8P9-201ENST00000558927 1449 ntBASIC16.95■□□□□ 0.3
FOXG1P55316 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXG1P55316 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.94■□□□□ 0.3
FOXG1P55316 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXG1P55316 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 FSCN1P1-201ENST00000568912 1481 ntBASIC16.94■□□□□ 0.3
FOXG1P55316 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXG1P55316 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 AC004951.3-201ENST00000418645 1148 ntBASIC16.94■□□□□ 0.3
FOXG1P55316 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
FOXG1P55316 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXG1P55316 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXG1P55316 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.94■□□□□ 0.3
FOXG1P55316 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
FOXG1P55316 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.94■□□□□ 0.3
FOXG1P55316 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
FOXG1P55316 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
FOXG1P55316 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.93■□□□□ 0.3
FOXG1P55316 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXG1P55316 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.93■□□□□ 0.3
FOXG1P55316 AC093484.2-201ENST00000580996 2166 ntBASIC16.93■□□□□ 0.3
FOXG1P55316 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXG1P55316 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.93■□□□□ 0.3
FOXG1P55316 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
FOXG1P55316 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
FOXG1P55316 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXG1P55316 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
FOXG1P55316 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.93■□□□□ 0.3
FOXG1P55316 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
FOXG1P55316 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
FOXG1P55316 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
FOXG1P55316 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
FOXG1P55316 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXG1P55316 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXG1P55316 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXG1P55316 UNC93B2-201ENST00000285383 730 ntBASIC16.92■□□□□ 0.3
FOXG1P55316 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXG1P55316 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.92■□□□□ 0.3
FOXG1P55316 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
FOXG1P55316 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.92■□□□□ 0.3
FOXG1P55316 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
FOXG1P55316 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXG1P55316 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.92■□□□□ 0.3
FOXG1P55316 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.92■□□□□ 0.3
FOXG1P55316 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXG1P55316 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXG1P55316 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms