Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 AC130371.2-201ENST00000619443 611 ntBASIC21.17■□□□□ 0.98
NCKAP1LP55160 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NCKAP1LP55160 AC007952.6-201ENST00000573168 2673 ntBASIC21.17■□□□□ 0.98
NCKAP1LP55160 AC003957.1-201ENST00000625108 2673 ntBASIC21.17■□□□□ 0.98
NCKAP1LP55160 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NCKAP1LP55160 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 KRT17P2-201ENST00000300992 1314 ntBASIC21.16■□□□□ 0.98
NCKAP1LP55160 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 AC011298.2-201ENST00000617989 482 ntBASIC21.16■□□□□ 0.98
NCKAP1LP55160 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NCKAP1LP55160 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.16■□□□□ 0.98
NCKAP1LP55160 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 AC116562.4-201ENST00000641316 2276 ntBASIC21.15■□□□□ 0.98
NCKAP1LP55160 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
NCKAP1LP55160 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NCKAP1LP55160 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 AL032819.2-201ENST00000624543 2162 ntBASIC21.14■□□□□ 0.98
NCKAP1LP55160 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 AC005332.7-201ENST00000614046 2005 ntBASIC21.14■□□□□ 0.98
NCKAP1LP55160 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NCKAP1LP55160 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.14■□□□□ 0.97
NCKAP1LP55160 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.14■□□□□ 0.97
NCKAP1LP55160 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
NCKAP1LP55160 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.14■□□□□ 0.97
NCKAP1LP55160 AL355075.4-201ENST00000554988 638 ntBASIC21.14■□□□□ 0.97
NCKAP1LP55160 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NCKAP1LP55160 TEX21P-204ENST00000641479 1693 ntBASIC21.14■□□□□ 0.97
NCKAP1LP55160 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.14■□□□□ 0.97
NCKAP1LP55160 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NCKAP1LP55160 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NCKAP1LP55160 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms