Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.47■□□□□ 0.71
LIMK2P53671 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
LIMK2P53671 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LIMK2P53671 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LIMK2P53671 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.46■□□□□ 0.71
LIMK2P53671 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.46■□□□□ 0.71
LIMK2P53671 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LIMK2P53671 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.46■□□□□ 0.71
LIMK2P53671 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.46■□□□□ 0.71
LIMK2P53671 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 AC133681.1-201ENST00000465482 601 ntBASIC19.46■□□□□ 0.71
LIMK2P53671 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.46■□□□□ 0.71
LIMK2P53671 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
LIMK2P53671 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LIMK2P53671 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LIMK2P53671 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
LIMK2P53671 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.46■□□□□ 0.71
LIMK2P53671 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
LIMK2P53671 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LIMK2P53671 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
LIMK2P53671 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 AC124016.1-201ENST00000609552 612 ntBASIC19.45■□□□□ 0.7
LIMK2P53671 AL023875.1-201ENST00000640777 796 ntBASIC19.45■□□□□ 0.7
LIMK2P53671 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
LIMK2P53671 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LIMK2P53671 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LIMK2P53671 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.45■□□□□ 0.7
LIMK2P53671 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.44■□□□□ 0.7
LIMK2P53671 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LIMK2P53671 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LIMK2P53671 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LIMK2P53671 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LIMK2P53671 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.44■□□□□ 0.7
LIMK2P53671 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
LIMK2P53671 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
LIMK2P53671 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.44■□□□□ 0.7
LIMK2P53671 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.44■□□□□ 0.7
LIMK2P53671 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.44■□□□□ 0.7
LIMK2P53671 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
LIMK2P53671 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
LIMK2P53671 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.44■□□□□ 0.7
LIMK2P53671 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.44■□□□□ 0.7
LIMK2P53671 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LIMK2P53671 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LIMK2P53671 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
LIMK2P53671 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
LIMK2P53671 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.43■□□□□ 0.7
LIMK2P53671 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
LIMK2P53671 AC239809.2-201ENST00000415381 517 ntBASIC19.43■□□□□ 0.7
LIMK2P53671 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.43■□□□□ 0.7
LIMK2P53671 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
LIMK2P53671 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.43■□□□□ 0.7
LIMK2P53671 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.43■□□□□ 0.7
LIMK2P53671 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.43■□□□□ 0.7
LIMK2P53671 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.43■□□□□ 0.7
LIMK2P53671 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms