Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
COPAP53621 AC018553.1-201ENST00000616682 1458 ntBASIC19.9■□□□□ 0.78
COPAP53621 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.9■□□□□ 0.78
COPAP53621 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
COPAP53621 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.9■□□□□ 0.78
COPAP53621 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.9■□□□□ 0.78
COPAP53621 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.9■□□□□ 0.78
COPAP53621 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COPAP53621 AC098818.2-201ENST00000564925 2320 ntBASIC19.9■□□□□ 0.78
COPAP53621 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.9■□□□□ 0.78
COPAP53621 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
COPAP53621 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COPAP53621 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.89■□□□□ 0.78
COPAP53621 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
COPAP53621 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COPAP53621 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COPAP53621 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.89■□□□□ 0.77
COPAP53621 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.89■□□□□ 0.77
COPAP53621 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
COPAP53621 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
COPAP53621 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.89■□□□□ 0.77
COPAP53621 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.89■□□□□ 0.77
COPAP53621 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.89■□□□□ 0.77
COPAP53621 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.89■□□□□ 0.77
COPAP53621 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.89■□□□□ 0.77
COPAP53621 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COPAP53621 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COPAP53621 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.88■□□□□ 0.77
COPAP53621 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.88■□□□□ 0.77
COPAP53621 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COPAP53621 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.88■□□□□ 0.77
COPAP53621 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.88■□□□□ 0.77
COPAP53621 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.88■□□□□ 0.77
COPAP53621 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.88■□□□□ 0.77
COPAP53621 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.88■□□□□ 0.77
COPAP53621 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.88■□□□□ 0.77
COPAP53621 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.88■□□□□ 0.77
COPAP53621 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.88■□□□□ 0.77
COPAP53621 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.88■□□□□ 0.77
COPAP53621 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
COPAP53621 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.88■□□□□ 0.77
COPAP53621 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.88■□□□□ 0.77
COPAP53621 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COPAP53621 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
COPAP53621 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
COPAP53621 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.87■□□□□ 0.77
COPAP53621 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.87■□□□□ 0.77
COPAP53621 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
COPAP53621 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.87■□□□□ 0.77
COPAP53621 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.87■□□□□ 0.77
COPAP53621 AC145285.6-201ENST00000604632 637 ntBASIC19.87■□□□□ 0.77
COPAP53621 MIR6786-201ENST00000616843 113 ntBASIC19.87■□□□□ 0.77
COPAP53621 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms