Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PDX1P52945 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PDX1P52945 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.75■□□□□ 0.59
PDX1P52945 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.75■□□□□ 0.59
PDX1P52945 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PDX1P52945 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.75■□□□□ 0.59
PDX1P52945 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.75■□□□□ 0.59
PDX1P52945 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PDX1P52945 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.74■□□□□ 0.59
PDX1P52945 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.74■□□□□ 0.59
PDX1P52945 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.74■□□□□ 0.59
PDX1P52945 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PDX1P52945 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.74■□□□□ 0.59
PDX1P52945 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDX1P52945 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 AC096733.2-201ENST00000609937 1394 ntBASIC18.74■□□□□ 0.59
PDX1P52945 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PDX1P52945 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.74■□□□□ 0.59
PDX1P52945 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
PDX1P52945 AC128688.1-201ENST00000487626 519 ntBASIC18.74■□□□□ 0.59
PDX1P52945 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.74■□□□□ 0.59
PDX1P52945 SLC25A1P4-201ENST00000567977 778 ntBASIC18.74■□□□□ 0.59
PDX1P52945 AC011298.2-201ENST00000617989 482 ntBASIC18.74■□□□□ 0.59
PDX1P52945 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PDX1P52945 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PDX1P52945 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 AFG3L1P-217ENST00000557444 2447 ntBASIC18.73■□□□□ 0.59
PDX1P52945 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PDX1P52945 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDX1P52945 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PDX1P52945 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
PDX1P52945 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.73■□□□□ 0.59
PDX1P52945 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.73■□□□□ 0.59
PDX1P52945 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.73■□□□□ 0.59
PDX1P52945 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.73■□□□□ 0.59
PDX1P52945 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
PDX1P52945 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PDX1P52945 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PDX1P52945 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.72■□□□□ 0.59
PDX1P52945 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDX1P52945 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
PDX1P52945 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.72■□□□□ 0.59
PDX1P52945 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.72■□□□□ 0.59
PDX1P52945 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.72■□□□□ 0.59
PDX1P52945 AC022616.7-201ENST00000525383 220 ntBASIC18.72■□□□□ 0.59
PDX1P52945 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
PDX1P52945 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.72■□□□□ 0.59
PDX1P52945 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
PDX1P52945 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.72■□□□□ 0.59
PDX1P52945 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 TCF3P1-201ENST00000423021 1937 ntBASIC18.72■□□□□ 0.59
PDX1P52945 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PDX1P52945 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
PDX1P52945 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.71■□□□□ 0.59
PDX1P52945 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms