Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CDR1P51861 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.09■□□□□ 0.97
CDR1P51861 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
CDR1P51861 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDR1P51861 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC21.09■□□□□ 0.97
CDR1P51861 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDR1P51861 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21.09■□□□□ 0.97
CDR1P51861 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.09■□□□□ 0.97
CDR1P51861 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.09■□□□□ 0.97
CDR1P51861 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.09■□□□□ 0.97
CDR1P51861 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
CDR1P51861 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CDR1P51861 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDR1P51861 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.09■□□□□ 0.97
CDR1P51861 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CDR1P51861 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR1P51861 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDR1P51861 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.09■□□□□ 0.97
CDR1P51861 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDR1P51861 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.09■□□□□ 0.97
CDR1P51861 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDR1P51861 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDR1P51861 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.08■□□□□ 0.97
CDR1P51861 NBPF21P-201ENST00000425093 1451 ntBASIC21.08■□□□□ 0.97
CDR1P51861 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR1P51861 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDR1P51861 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR1P51861 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CDR1P51861 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
CDR1P51861 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.08■□□□□ 0.97
CDR1P51861 AC133681.1-201ENST00000465482 601 ntBASIC21.08■□□□□ 0.97
CDR1P51861 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDR1P51861 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.08■□□□□ 0.97
CDR1P51861 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDR1P51861 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CDR1P51861 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDR1P51861 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.08■□□□□ 0.96
CDR1P51861 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.08■□□□□ 0.96
CDR1P51861 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.07■□□□□ 0.96
CDR1P51861 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC21.07■□□□□ 0.96
CDR1P51861 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDR1P51861 RPS2P55-201ENST00000397318 883 ntBASIC21.07■□□□□ 0.96
CDR1P51861 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 AC107956.1-201ENST00000494359 873 ntBASIC21.07■□□□□ 0.96
CDR1P51861 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.07■□□□□ 0.96
CDR1P51861 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC21.07■□□□□ 0.96
CDR1P51861 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.07■□□□□ 0.96
CDR1P51861 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDR1P51861 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDR1P51861 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.06■□□□□ 0.96
CDR1P51861 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC21.06■□□□□ 0.96
CDR1P51861 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.06■□□□□ 0.96
CDR1P51861 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CDR1P51861 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDR1P51861 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.06■□□□□ 0.96
CDR1P51861 AL121829.2-201ENST00000620908 328 ntBASIC21.06■□□□□ 0.96
CDR1P51861 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CDR1P51861 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.06■□□□□ 0.96
CDR1P51861 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDR1P51861 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDR1P51861 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDR1P51861 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
CDR1P51861 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CDR1P51861 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.05■□□□□ 0.96
CDR1P51861 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 MIR4497-201ENST00000583208 89 ntBASIC21.05■□□□□ 0.96
CDR1P51861 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC21.05■□□□□ 0.96
CDR1P51861 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.05■□□□□ 0.96
CDR1P51861 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDR1P51861 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CDR1P51861 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms