Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
CLCNKBP51801 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.64■□□□□ 0.9
CLCNKBP51801 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.64■□□□□ 0.9
CLCNKBP51801 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.64■□□□□ 0.9
CLCNKBP51801 KRT8P11-201ENST00000409686 1436 ntBASIC20.64■□□□□ 0.89
CLCNKBP51801 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CLCNKBP51801 AC007663.1-201ENST00000438948 1240 ntBASIC20.64■□□□□ 0.89
CLCNKBP51801 ATP5G1P1-201ENST00000448724 379 ntBASIC20.64■□□□□ 0.89
CLCNKBP51801 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCNKBP51801 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCNKBP51801 AL023803.3-201ENST00000615559 522 ntBASIC20.64■□□□□ 0.89
CLCNKBP51801 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.64■□□□□ 0.89
CLCNKBP51801 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCNKBP51801 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
CLCNKBP51801 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLCNKBP51801 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCNKBP51801 AC092338.2-201ENST00000568827 1415 ntBASIC20.63■□□□□ 0.89
CLCNKBP51801 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
CLCNKBP51801 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCNKBP51801 AC104076.2-201ENST00000448912 469 ntBASIC20.63■□□□□ 0.89
CLCNKBP51801 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.63■□□□□ 0.89
CLCNKBP51801 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CLCNKBP51801 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CLCNKBP51801 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CLCNKBP51801 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.63■□□□□ 0.89
CLCNKBP51801 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.63■□□□□ 0.89
CLCNKBP51801 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.63■□□□□ 0.89
CLCNKBP51801 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLCNKBP51801 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.62■□□□□ 0.89
CLCNKBP51801 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLCNKBP51801 HMGA1P5-201ENST00000412453 271 ntBASIC20.62■□□□□ 0.89
CLCNKBP51801 AL445228.2-201ENST00000605589 952 ntBASIC20.62■□□□□ 0.89
CLCNKBP51801 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.62■□□□□ 0.89
CLCNKBP51801 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLCNKBP51801 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.62■□□□□ 0.89
CLCNKBP51801 SDHAP1-207ENST00000440850 2000 ntBASIC20.61■□□□□ 0.89
CLCNKBP51801 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.61■□□□□ 0.89
CLCNKBP51801 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCNKBP51801 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CLCNKBP51801 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CLCNKBP51801 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCNKBP51801 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.61■□□□□ 0.89
CLCNKBP51801 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.61■□□□□ 0.89
CLCNKBP51801 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLCNKBP51801 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCNKBP51801 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CLCNKBP51801 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.61■□□□□ 0.89
CLCNKBP51801 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLCNKBP51801 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCNKBP51801 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.6■□□□□ 0.89
CLCNKBP51801 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.6■□□□□ 0.89
CLCNKBP51801 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLCNKBP51801 TSPY17P-201ENST00000450329 467 ntBASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms