Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CLCN3P51790 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.25■□□□□ 0.99
CLCN3P51790 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN3P51790 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN3P51790 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLCN3P51790 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
CLCN3P51790 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN3P51790 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN3P51790 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 KRT8P11-201ENST00000409686 1436 ntBASIC21.24■□□□□ 0.99
CLCN3P51790 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN3P51790 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN3P51790 LIN28AP1-201ENST00000429574 405 ntBASIC21.24■□□□□ 0.99
CLCN3P51790 SLC25A1P2-201ENST00000430693 912 ntBASIC21.24■□□□□ 0.99
CLCN3P51790 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 CCR12P-201ENST00000446203 998 ntBASIC21.24■□□□□ 0.99
CLCN3P51790 ATP5G1P1-201ENST00000448724 379 ntBASIC21.24■□□□□ 0.99
CLCN3P51790 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN3P51790 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 AL049597.2-201ENST00000565575 961 ntBASIC21.24■□□□□ 0.99
CLCN3P51790 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.24■□□□□ 0.99
CLCN3P51790 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CLCN3P51790 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLCN3P51790 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLCN3P51790 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCN3P51790 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
CLCN3P51790 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CLCN3P51790 AC007663.1-201ENST00000438948 1240 ntBASIC21.23■□□□□ 0.99
CLCN3P51790 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CLCN3P51790 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCN3P51790 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.23■□□□□ 0.99
CLCN3P51790 AL445228.2-201ENST00000605589 952 ntBASIC21.23■□□□□ 0.99
CLCN3P51790 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CLCN3P51790 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLCN3P51790 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLCN3P51790 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLCN3P51790 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 AC092338.2-201ENST00000568827 1415 ntBASIC21.22■□□□□ 0.99
CLCN3P51790 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.22■□□□□ 0.99
CLCN3P51790 AC104076.2-201ENST00000448912 469 ntBASIC21.22■□□□□ 0.99
CLCN3P51790 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.22■□□□□ 0.99
CLCN3P51790 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CLCN3P51790 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CLCN3P51790 AL023803.3-201ENST00000615559 522 ntBASIC21.22■□□□□ 0.99
CLCN3P51790 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 SDHAP1-207ENST00000440850 2000 ntBASIC21.22■□□□□ 0.99
CLCN3P51790 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.22■□□□□ 0.99
CLCN3P51790 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLCN3P51790 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CLCN3P51790 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.22■□□□□ 0.99
CLCN3P51790 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.21■□□□□ 0.99
CLCN3P51790 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.21■□□□□ 0.99
CLCN3P51790 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.21■□□□□ 0.99
CLCN3P51790 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CLCN3P51790 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CLCN3P51790 HMGA1P5-201ENST00000412453 271 ntBASIC21.21■□□□□ 0.99
CLCN3P51790 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.21■□□□□ 0.99
CLCN3P51790 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.21■□□□□ 0.99
CLCN3P51790 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.21■□□□□ 0.99
CLCN3P51790 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 KRT18P35-201ENST00000510488 1269 ntBASIC21.21■□□□□ 0.99
CLCN3P51790 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC21.21■□□□□ 0.99
CLCN3P51790 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CLCN3P51790 AC006011.2-201ENST00000621313 1158 ntBASIC21.21■□□□□ 0.99
CLCN3P51790 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLCN3P51790 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CLCN3P51790 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms