Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CCR12P-201ENST00000446203 998 ntBASIC20.57■□□□□ 0.88
BRCC3P46736 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
BRCC3P46736 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.57■□□□□ 0.88
BRCC3P46736 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
BRCC3P46736 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.57■□□□□ 0.88
BRCC3P46736 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.57■□□□□ 0.88
BRCC3P46736 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
BRCC3P46736 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
BRCC3P46736 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.57■□□□□ 0.88
BRCC3P46736 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.56■□□□□ 0.88
BRCC3P46736 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCC3P46736 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.56■□□□□ 0.88
BRCC3P46736 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRCC3P46736 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.56■□□□□ 0.88
BRCC3P46736 SLC25A1P2-201ENST00000430693 912 ntBASIC20.56■□□□□ 0.88
BRCC3P46736 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
BRCC3P46736 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
BRCC3P46736 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.56■□□□□ 0.88
BRCC3P46736 AL023803.3-201ENST00000615559 522 ntBASIC20.56■□□□□ 0.88
BRCC3P46736 AC006011.2-201ENST00000621313 1158 ntBASIC20.56■□□□□ 0.88
BRCC3P46736 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.56■□□□□ 0.88
BRCC3P46736 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
BRCC3P46736 ZNF815P-204ENST00000434898 1737 ntBASIC20.56■□□□□ 0.88
BRCC3P46736 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.55■□□□□ 0.88
BRCC3P46736 AC092338.2-201ENST00000568827 1415 ntBASIC20.55■□□□□ 0.88
BRCC3P46736 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
BRCC3P46736 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.55■□□□□ 0.88
BRCC3P46736 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.55■□□□□ 0.88
BRCC3P46736 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
BRCC3P46736 HMGA1P5-201ENST00000412453 271 ntBASIC20.55■□□□□ 0.88
BRCC3P46736 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.55■□□□□ 0.88
BRCC3P46736 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.55■□□□□ 0.88
BRCC3P46736 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
BRCC3P46736 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.55■□□□□ 0.88
BRCC3P46736 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
BRCC3P46736 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
BRCC3P46736 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BRCC3P46736 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.54■□□□□ 0.88
BRCC3P46736 DUX4L26-201ENST00000489078 1255 ntBASIC20.54■□□□□ 0.88
BRCC3P46736 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
BRCC3P46736 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.54■□□□□ 0.88
BRCC3P46736 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.54■□□□□ 0.88
BRCC3P46736 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
BRCC3P46736 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCC3P46736 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.54■□□□□ 0.88
BRCC3P46736 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCC3P46736 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCC3P46736 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCC3P46736 SDHAP1-207ENST00000440850 2000 ntBASIC20.53■□□□□ 0.88
BRCC3P46736 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCC3P46736 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRCC3P46736 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCC3P46736 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCC3P46736 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
BRCC3P46736 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.53■□□□□ 0.88
BRCC3P46736 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCC3P46736 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
BRCC3P46736 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms