Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.46■□□□□ 0.39
NR4A2P43354 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
NR4A2P43354 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.46■□□□□ 0.38
NR4A2P43354 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.38
NR4A2P43354 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.45■□□□□ 0.38
NR4A2P43354 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 LSM12P1-201ENST00000411836 588 ntBASIC17.45■□□□□ 0.38
NR4A2P43354 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 AC245052.3-201ENST00000450182 901 ntBASIC17.45■□□□□ 0.38
NR4A2P43354 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.45■□□□□ 0.38
NR4A2P43354 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.45■□□□□ 0.38
NR4A2P43354 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.45■□□□□ 0.38
NR4A2P43354 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.45■□□□□ 0.38
NR4A2P43354 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.45■□□□□ 0.38
NR4A2P43354 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 TREX1-205ENST00000625293 1783 ntBASIC17.45■□□□□ 0.38
NR4A2P43354 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.45■□□□□ 0.38
NR4A2P43354 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.45■□□□□ 0.38
NR4A2P43354 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.45■□□□□ 0.38
NR4A2P43354 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NR4A2P43354 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NR4A2P43354 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.44■□□□□ 0.38
NR4A2P43354 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.44■□□□□ 0.38
NR4A2P43354 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 ESRRAP1-201ENST00000400596 1257 ntBASIC17.44■□□□□ 0.38
NR4A2P43354 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NR4A2P43354 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.44■□□□□ 0.38
NR4A2P43354 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.44■□□□□ 0.38
NR4A2P43354 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NR4A2P43354 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.44■□□□□ 0.38
NR4A2P43354 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.44■□□□□ 0.38
NR4A2P43354 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
NR4A2P43354 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
NR4A2P43354 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.44■□□□□ 0.38
NR4A2P43354 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.44■□□□□ 0.38
NR4A2P43354 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NR4A2P43354 AC079598.2-202ENST00000546624 1451 ntBASIC17.44■□□□□ 0.38
NR4A2P43354 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NR4A2P43354 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.43■□□□□ 0.38
NR4A2P43354 PRORSD1P-201ENST00000295112 541 ntBASIC17.43■□□□□ 0.38
NR4A2P43354 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
NR4A2P43354 AC091799.1-201ENST00000422823 811 ntBASIC17.43■□□□□ 0.38
NR4A2P43354 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.43■□□□□ 0.38
NR4A2P43354 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.43■□□□□ 0.38
NR4A2P43354 CDV3P1-201ENST00000471403 739 ntBASIC17.43■□□□□ 0.38
NR4A2P43354 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.43■□□□□ 0.38
NR4A2P43354 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.43■□□□□ 0.38
NR4A2P43354 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NR4A2P43354 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.43■□□□□ 0.38
NR4A2P43354 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.43■□□□□ 0.38
NR4A2P43354 FAM21FP-204ENST00000608637 956 ntBASIC17.43■□□□□ 0.38
NR4A2P43354 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
NR4A2P43354 AL139384.1-201ENST00000612143 3047 ntBASIC17.43■□□□□ 0.38
NR4A2P43354 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC17.43■□□□□ 0.38
NR4A2P43354 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
NR4A2P43354 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 TNRC18P3-201ENST00000441896 2691 ntBASIC17.43■□□□□ 0.38
NR4A2P43354 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.43■□□□□ 0.38
NR4A2P43354 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NR4A2P43354 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR4A2P43354 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NR4A2P43354 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NR4A2P43354 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.42■□□□□ 0.38
NR4A2P43354 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.42■□□□□ 0.38
NR4A2P43354 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms