Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC130P13994 AC008040.2-201ENST00000461049 708 ntBASIC20.47■□□□□ 0.87
CCDC130P13994 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC130P13994 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC130P13994 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC130P13994 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC130P13994 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC130P13994 Z82202.1-201ENST00000623446 1880 ntBASIC20.47■□□□□ 0.87
CCDC130P13994 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC130P13994 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC130P13994 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC130P13994 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CCDC130P13994 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC130P13994 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 RBM17P1-201ENST00000453646 1190 ntBASIC20.46■□□□□ 0.87
CCDC130P13994 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC130P13994 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC130P13994 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CCDC130P13994 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC130P13994 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC130P13994 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC130P13994 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC130P13994 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CCDC130P13994 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC130P13994 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC130P13994 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC130P13994 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC130P13994 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.45■□□□□ 0.86
CCDC130P13994 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC130P13994 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CCDC130P13994 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC130P13994 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CCDC130P13994 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.45■□□□□ 0.86
CCDC130P13994 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC130P13994 AC011298.2-201ENST00000617989 482 ntBASIC20.45■□□□□ 0.86
CCDC130P13994 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.45■□□□□ 0.86
CCDC130P13994 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CCDC130P13994 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.45■□□□□ 0.86
CCDC130P13994 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC130P13994 FSCN1P1-201ENST00000568912 1481 ntBASIC20.44■□□□□ 0.86
CCDC130P13994 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC130P13994 KRT8P41-201ENST00000533985 1514 ntBASIC20.44■□□□□ 0.86
CCDC130P13994 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC130P13994 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC130P13994 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC130P13994 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC130P13994 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC130P13994 AC091390.4-202ENST00000476426 537 ntBASIC20.44■□□□□ 0.86
CCDC130P13994 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.44■□□□□ 0.86
CCDC130P13994 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.44■□□□□ 0.86
CCDC130P13994 AP000525.1-201ENST00000608286 694 ntBASIC20.44■□□□□ 0.86
CCDC130P13994 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CCDC130P13994 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.44■□□□□ 0.86
CCDC130P13994 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.44■□□□□ 0.86
CCDC130P13994 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC130P13994 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CCDC130P13994 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 AC079598.2-202ENST00000546624 1451 ntBASIC20.43■□□□□ 0.86
CCDC130P13994 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC130P13994 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CCDC130P13994 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.43■□□□□ 0.86
CCDC130P13994 AC004951.3-201ENST00000418645 1148 ntBASIC20.43■□□□□ 0.86
CCDC130P13994 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CCDC130P13994 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
CCDC130P13994 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.43■□□□□ 0.86
CCDC130P13994 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms