Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOBP13765 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOBP13765 AC098818.2-201ENST00000564925 2320 ntBASIC17.31■□□□□ 0.36
HLA-DOBP13765 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HLA-DOBP13765 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
HLA-DOBP13765 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOBP13765 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HLA-DOBP13765 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DOBP13765 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 AC004264.1-201ENST00000608354 794 ntBASIC17.3■□□□□ 0.36
HLA-DOBP13765 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 AP000974.1-201ENST00000623909 2387 ntBASIC17.3■□□□□ 0.36
HLA-DOBP13765 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.3■□□□□ 0.36
HLA-DOBP13765 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DOBP13765 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 TEX21P-204ENST00000641479 1693 ntBASIC17.29■□□□□ 0.36
HLA-DOBP13765 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 C1QBPP2-201ENST00000528754 825 ntBASIC17.29■□□□□ 0.36
HLA-DOBP13765 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOBP13765 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOBP13765 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 FAM201B-201ENST00000458407 597 ntBASIC17.28■□□□□ 0.36
HLA-DOBP13765 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOBP13765 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOBP13765 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms