Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.08■□□□□ 0.64
COL6A2P12110 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL6A2P12110 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.08■□□□□ 0.64
COL6A2P12110 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.08■□□□□ 0.64
COL6A2P12110 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
COL6A2P12110 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 KRT18P16-201ENST00000510337 1294 ntBASIC19.07■□□□□ 0.64
COL6A2P12110 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.07■□□□□ 0.64
COL6A2P12110 MIR4758-201ENST00000577688 71 ntBASIC19.07■□□□□ 0.64
COL6A2P12110 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL6A2P12110 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL6A2P12110 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.07■□□□□ 0.64
COL6A2P12110 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.06■□□□□ 0.64
COL6A2P12110 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 AC092368.3-202ENST00000574180 1591 ntBASIC19.06■□□□□ 0.64
COL6A2P12110 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
COL6A2P12110 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL6A2P12110 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
COL6A2P12110 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL6A2P12110 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
COL6A2P12110 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.06■□□□□ 0.64
COL6A2P12110 AC097658.1-201ENST00000475555 843 ntBASIC19.06■□□□□ 0.64
COL6A2P12110 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.06■□□□□ 0.64
COL6A2P12110 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.06■□□□□ 0.64
COL6A2P12110 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.06■□□□□ 0.64
COL6A2P12110 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.06■□□□□ 0.64
COL6A2P12110 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC19.06■□□□□ 0.64
COL6A2P12110 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.06■□□□□ 0.64
COL6A2P12110 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL6A2P12110 AL031598.1-201ENST00000561511 1773 ntBASIC19.06■□□□□ 0.64
COL6A2P12110 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL6A2P12110 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.05■□□□□ 0.64
COL6A2P12110 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.05■□□□□ 0.64
COL6A2P12110 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.05■□□□□ 0.64
COL6A2P12110 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
COL6A2P12110 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
COL6A2P12110 SLC29A4P1-201ENST00000398760 971 ntBASIC19.05■□□□□ 0.64
COL6A2P12110 AC006970.2-201ENST00000450065 779 ntBASIC19.05■□□□□ 0.64
COL6A2P12110 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.05■□□□□ 0.64
COL6A2P12110 AL121829.2-201ENST00000620908 328 ntBASIC19.05■□□□□ 0.64
COL6A2P12110 MYC-209ENST00000641252 345 ntBASIC19.05■□□□□ 0.64
COL6A2P12110 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.05■□□□□ 0.64
COL6A2P12110 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL6A2P12110 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.05■□□□□ 0.64
COL6A2P12110 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COL6A2P12110 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
COL6A2P12110 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
COL6A2P12110 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A2P12110 IRX1P1-201ENST00000438849 1838 ntBASIC19.04■□□□□ 0.64
COL6A2P12110 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
COL6A2P12110 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A2P12110 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A2P12110 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL6A2P12110 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.04■□□□□ 0.64
COL6A2P12110 Z98044.1-201ENST00000632503 1764 ntBASIC19.04■□□□□ 0.64
COL6A2P12110 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms