Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC175P0C221 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC175P0C221 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC175P0C221 AL133373.2-201ENST00000623187 2828 ntBASIC20.84■□□□□ 0.93
CCDC175P0C221 AL354751.1-201ENST00000412768 1863 ntBASIC20.84■□□□□ 0.93
CCDC175P0C221 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC175P0C221 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CCDC175P0C221 AC090340.1-201ENST00000620778 4980 ntBASIC20.84■□□□□ 0.93
CCDC175P0C221 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC175P0C221 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC175P0C221 CYP2T3P-201ENST00000601990 817 ntBASIC20.84■□□□□ 0.93
CCDC175P0C221 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC175P0C221 AL512353.2-201ENST00000448759 1962 ntBASIC20.84■□□□□ 0.93
CCDC175P0C221 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.84■□□□□ 0.93
CCDC175P0C221 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
CCDC175P0C221 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC175P0C221 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC175P0C221 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.84■□□□□ 0.93
CCDC175P0C221 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC175P0C221 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC175P0C221 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC175P0C221 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC175P0C221 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC175P0C221 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC175P0C221 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC175P0C221 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC175P0C221 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC175P0C221 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.83■□□□□ 0.93
CCDC175P0C221 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC175P0C221 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC175P0C221 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC175P0C221 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC175P0C221 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CCDC175P0C221 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC175P0C221 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC175P0C221 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC175P0C221 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.83■□□□□ 0.92
CCDC175P0C221 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC175P0C221 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC175P0C221 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CCDC175P0C221 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC175P0C221 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CCDC175P0C221 C2orf69P4-201ENST00000565394 541 ntBASIC20.82■□□□□ 0.92
CCDC175P0C221 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC175P0C221 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC175P0C221 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC175P0C221 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC175P0C221 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
CCDC175P0C221 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC175P0C221 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC175P0C221 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC175P0C221 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC175P0C221 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC175P0C221 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CCDC175P0C221 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC175P0C221 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC175P0C221 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
CCDC175P0C221 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC175P0C221 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC175P0C221 IRX1P1-201ENST00000438849 1838 ntBASIC20.81■□□□□ 0.92
CCDC175P0C221 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC175P0C221 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC175P0C221 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC175P0C221 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC175P0C221 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC175P0C221 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC175P0C221 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms